CIEMAR

Peer reviewed papers

  • Silva, A.F., J.J. Castro, E. Pereira, J.P. Marques, T. Silva, P.G. Lino, A. Candeias-Mendes, P. Pousão-Ferreira, B. Pinto, J.L. Costa, P.R. Almeida & B.R. Quintella, 2025. An acclimatization period in a cage promotes site fidelity of hatchery-reared dusky groupers to the release areas. Aquatic Conservation: Marine and Freshwater Ecosystems , 35: e70125. https://doi.org/10.1002/aqc.70125
  • Sousa, A., Morán, P., Acuña, J.L., Vázquez, E., Cruz, T. & Macho, G., 2024. Phenotypical variability affecting the commercial value of the stalked barnacle Pollicipes pollicipes : no evidence for epigenetic variation. Estuarine, Coastal and Shelf Science , 303, 108807. https://doi.org/10.1016/j.ecss.2024.108807
  • Gómez‑del Campo, V., Arrontes, J., Cruz, T., Vázquez, E., Macho, G., Thiébaut, E., Geiger, K., Fernandes, J. N., Jacinto, D., Aguión, A., Silva, T., Mateus, D., Román, S., Herrero, A., Iván‑Baragaño, Y., Broudin, C., Perrier. L, Davoult, D., Fernández, C., Rico, J. M., Sostres, J., Guardado, C., Castro, J. J. & Acuña, J. L., 2024. Recovery after exploitation of stalked barnacles is facilitated by the presence of conspecifics: a study of post‑harvest gap recolonization dynamics in SW Europe. Reviews in Fish Biology and Fisheries . https://doi.org/10.1007/s11160-024-09900-z
  • Seabra MI, Penteado N, Cruz T & Hawkins SJ, 2023. Variability and connectivity in populations of different limpet species across rockpool-generated mosaic landscapes. Frontiers in Marine Science , 10, 1206159.
  • Rocha A.C., Ressurreição M., Baeta A., Veríssimo H., Camarão B., Fernández-Boo S., Pombo A., Lourenço S., Gomes A.S., Santos P.M., Jacinto D., Mateus D., Maresca F., Mourato C., Serrão E. & Verdelhos T., 2023. Temporal and spatial variability in the isotopic composition of sea urchins along Portuguese coast. Marine Environmental Research : 106236.
  • Correia MJ, Lopes PM, Santos PM, Jacinto D, Mateus D, Maresca F, Quintella BR, Cruz T, Lourenço S, Pombo A & Costa JL., 2023. Pilot studies for stock enhancement of purple sea urchins (Paracentrotus lividus , Lamarck, 1816): usefulness of refuges and calcein marking for the monitoring of juveniles released into the natural environment. Aquatic Living Resources , 36: 12.
  • Castro, N., Pereira, T.J., Costa, A., Sertório, J., Fernandes, A., Tavares, M.J. & Castro, J.J., 2023. Using fish assemblages to assess the ecological effects of marine protection on rocky habitats in a Portuguese natural park. Hydrobiology , 2: 181–195.
  • Silva, A.F.; B. Horta e Costa; J.L. Costa; E. Pereira; J.P. Marques; J.J. Castro; P.G. Lino; A. Candeias-Mendes; P. Pousão-Ferreira; I. Sousa; L. Bentes; J.M.S. Gonçalves; P.R. Almeida & B.R. Quintella, 2022. Movements of hatchery-reared dusky groupers released in a Northeast Atlantic Coastal Marine Protected Area. Journal of Marine Science and Engineering , 10 (7): 904.
  • Santos PM, Ruivo Quintella B, Jacinto D, Gomes A, Saldanha C, Lourenço S, Mega Lopes P, Correia MJ, Mateus D, Cruz T, Pombo A & Lino Costa J., 2022. Physical and chemical tagging methods for the sea urchin Paracentrotus lividus  (Echinodermata: Echinoidea). Scientia Marina , 86(3): e038.
  • Parrondo M, Morán P, Ballenghien M, Acuña  JL, Aguión A, Arrontes J, Chiss  J, Cruz T, Fernandes JN, García-Flórez L, García-Vázquez E, Geige, K, Macho G, Thiébaut E, Weidberg N, Jollivet D & Borrell YJ, 2022. Chaotic Genetic Patchiness in the Highly Valued Atlantic Stalked Barnacle Pollicipes pollicipes  from the Iberian Peninsula: Implications for Fisheries Management. Frontiers in Marine Science , 9, p.801780.
  • Nolasco R, Dubert J, Acuña JL, Aguión A, Cruz T, Fernandes JN, Geiger K, Jacinto D, Macho G, Mateus D, Rivera A, Román S, Thíebaut E, Vázquez E & H Queiroga, 2022.Biophysical modelling of larval dispersal and population connectivity of a stalked barnacle: implications for fishery governance. Marine Ecology Progress Series , 694:105-123.
  • Mamede R, Duarte IA, Caçador I, Tanner SE, Silva M, Jacinto D, Fonseca VF & B Duarte, 2022. Elemental fingerprinting of sea urchin (Paracentrotus lividus ) gonads to assess food safety and trace its geographic origin. Journal of Food Composition and Analysis , 114: 104764.
  • Geiger K, Rivera A, Aguión A, Álvarez J, Arrontes J, Borrell Y, Cruz T, Davoult D, Dubert J, Feis M, Fernandes JN, Fernández C, García-Flórez L, Jacinto D, Jollivet D, Macho G, Mateo E, Mateus D, Morán P, Muñiz C, Nicolle A, Nolasco R, Parrondo M, Queiroga H, Rico J, Sousa A, Román S, Silva T , Thíebaut E, Vázquez E & JL Acuña, 2022. Coping with poachers in European stalked barnacle fisheries: Insights from a stakeholder workshop. Marine Policy , 135, 104826.
  • Duarte B, Mamede R, Duarte IA, Caçador I, Tanner SE, Silva M, Jacinto D, Cruz T & VF Fonseca, 2022. Elemental Chemometrics as Tools to Depict Stalked Barnacle (Pollicipes pollicipes ) Harvest Locations and Food Safety. Molecules , 27,1298.
  • Cruz T, Jacinto D, Fernandes JN, Seabra MI, Van Syoc RJ, Power AM, Macho G, Sousa A, Castro JJ & SJ Hawkins, 2022. Pedunculate cirripedes of the genus Pollicipes: 25 years after Margaret Barnes' review. Oceanography and Marine Biology: An Annual Review , 60: 19-168.
  • Cardoso-Andrade M, Queiroga H, Rangel M, Sousa I, Belackova A, Bentes L, Oliveira F, Monteiro P, Sales Henriques N, Afonso CML, Silva AF, Quintella BR, Costa JL, Pais MP, Henriques S, Batista MI, Franco G, Gonçalves EJ, Henriques M, Leonardo T, Coelho P, Comas-González R, Fernández LP, Quiles-Pons C, Costa A, Espírito-Santo C, Castro JJ, Arenas F, Ramos S, Ferreira V, Gonçalves JMS & Horta e Costa B, 2022. Setting Performance Indicators for Coastal Marine Protected Areas: An Expert-Based Methodology. Frontiers in Marine Science , 9: 848039.
  • Aguión, A., Cruz, T. Acuña, J.L., Broudin, C., Castro, J.J., Davoult, D., Dubert, J., Fernandes, J.N., Geiger, K.J., Jacinto, D., Mateus, D., Muñiz, C., Nolasco, R., Perrier, L., Queiroga, H., Román, S., Silva, T., Thiébaut, E., Vázquez, E. & G. Macho, 2022. A large‑scale comparison of reproduction and recruitment of the stalked barnacle Pollicipes pollicipes  across Europe. Marine Biology , 169:63.
  • Fernandes J.N., Jacinto D., Penteado N., Sousa A., Mateus D., Seabra M.I., Silva T., Castellanos P., Castro J.J. & T. Cruz, 2021. Ten years of monitoring recruitment of the edible stalked barnacle Pollicipes pollicipes : linking to oceanographic variability. Limnology and Oceanography , 66: 2309–2318.
  • Castro, N., F. Romão, J.J. Castro, T.J. Pereira, S. Pedro, V. Viegas & J.L. Costa, 2021. Catches, sales and discards: Small-scale fisheries in a Portuguese Marine park. Regional Studies in Marine Science , 42: 101643.
  • Aguión, A., Ojea, E., García-Flórez, L., Cruz, T., Garmendia, J.M., Davoult, D., Queiroga, H., Rivera, A., Acuña-Fernández, J.L. & Macho, G., 2021. Establishing a governance threshold in small-scale fisheries to achieve sustainability. Ambio , 51: 652-665.
  • Sousa, A., D. Jacinto, N. Penteado, D. Pereira, T. Silva, J. J. Castro, S. M. Leandro & T. Cruz, 2020. Temporal variation of the fishers’ perception about the stalked barnacle (Pollicipes pollicipes ) fishery at the Berlengas Nature Reserve (Portugal). Regional Studies in Marine Science , 38: 101378.
  • Seabra, M. I., S. J. Hawkins, C. Espírito-Santo, J. J. Castro & T. Cruz, 2020. Rock-pools as nurseries for co-existing limpets: spatial and temporal patterns of limpet recruitment. Regional Studies in Marine Science , 37: 101339.
  • Seabra M.I., Cruz T., Fernandes J.N., Silva T. & Hawkins S.J., 2019. Recruitment of the limpet Patella ulyssiponensis  and its relationship with crustose coralline algae: patterns of juvenile distribution and larval settlement. Journal of the Marine Biological Association of the United Kingdom , 1–10.
  • Cabral, S., A. S. Alves, N. Castro, P. Chainho, E. Sá, L. Cancela da Fonseca, P. Fidalgo e Costa, J. Castro, J. Canning-Clode, A. Pombo & J. L. Costa, 2019. Polychaete annelids as live bait in Portugal: harvesting activity in brackish water systems. Ocean and Coastal Management , 181: 13 p.
  • Lamas, L., Peliz, A., Dias, J., Oliveira, P.B., Angélico, M.M., Castro, J.J., Fernandes, J.N., Trindade, A. & Cruz, T., 2017. Diurnal variability of inner-shelf circulation in the lee of a cape under upwelling conditions. Continental Shelf Research , 143: 67-77.
  • Trindade, A., Peliz, A., Dias, J., Lamas, L., Oliveira, P.B. & Cruz, T., 2016. Cross-shore transport in a daily varying upwelling regime: A case study of barnacle larvae on the southwestern Iberian coast. Continental Shelf Research , 127: 12-27.
  • Jacinto, D. & Cruz, T., 2016. Predicting Pollicipes pollicipes  (Crustacea: Cirripedia) abundance on intertidal rocky shores of SW Portugal: a multi-scale approach based on a simple fetch-based wave exposure index. Scientia Marina, 80 (2): 229-236.
  • Lima, F.P., Gomes, F., Seabra, R., Wethey, D.S., Seabra, M.I., Cruz, T.,Santos, A.M. & Hilbish, T. J., 2016. Loss of thermal refugia near equatorial range limits. Global Change Biology , 22 (1): 254-263.
  • Pinho, D., Bertocci, I., Arenas, F., Franco, J.N., Jacinto, D., Castro,J.J., Vieira, R., Sousa-Pinto, I., Wernberg, T. & Tuya, F., 2016. Spatial and temporal variation of kelp forests andassociated macroalgal assemblages along the Portuguese coast. Marine and Freshwater Research , 67: 113-122.
  • Jacinto, D., Penteado, N., Pereira, D., Sousa, A. & Cruz, T., 2015. Growth rate variation of the stalked barnacle Pollicipes pollicipes  (Crustacea:Cirripedia) using calcein as a chemical marker. ScientiaMarina , 79 (1): 117-123.
  • Franco, S.C., Aldred, N.,Sykes, A.V., Cruz, T. & Clare, A.S., 2015. The effects of rearingtemperature on reproductive conditioning of stalked barnacles (Pollicipes pollicipes ). Aquaculture , 448: 410-417.
  • Franco, J.N., Wernberg, T., Bertocci, I., Duarte, P., Jacinto, D.,Vasco-Rodrigues, N. & Tuya, F., 2015. Herbivory drives kelp recruits into ‘hiding’ in a warm ocean climate. Marine Ecology Progress Series , 536:1-9.
  • Félix, P.M., Correia, M.J., Chainho, P., Costa, J.L., Chaves, M.L., Cruz,T., Castro, J.J., Mirra, C., Domingos, I., Silva, A.C.F. & Cancela da Fonseca, L., 2015. Impact of freshwater inputson the spatial structure of benthic macroinvertebrate communities in twolandlocked coastal lagoons. Hydrobiologia , 758 (1):197-209.
  • Cruz, T., Fernandes, J.N., Van Syoc, R.J. & Newman, W., 2015. Manualda Classe Thecostraca. Subclasse Cirripedia. Superordem Thoracica. OrdemLepadiformes, Ordem Scalpelliformes, Ordem Verruciformes e Ordem Balaniformes. Revista IDE@-SEA .
  • Cruz, T., Jacinto, D., Sousa, A., Penteado, N., Pereira, D., Fernandes,J.N., Silva, T. & Castro, J.J., 2015. The state of the fishery, conservation and management of the stalkedbarnacle Pollicipes pollicipes  inPortugal. Marine Environmental Research , 112 (B): 73-80.
  • Chainho, P., Fernandes, A., Amorim, A, Ávila, S.P, Canning-Clode, J.,Castro, J.J., Costa, A.C., Costa, J.L., Cruz, T., Gollasch, S.,Grazziotin-Soares, C., Melo, R., Micael, J., Parente, M.I., Semedo, J., Silva,T., Sobral, D., Sousa, M., Torres, P., Veloso, V. & Costa, M.J., 2015. Non-indigenous species in Portuguese coastal areas,coastal lagoons, estuaries, and islands. Estuarine Coastal Shelf Science.http://dx.doi.org/10.1071/MF14318
  • Vafeiadou, A.M., P.Materatski, H. Adão, M. de Troch & T. Moens, 2014. Resource utilization andtrophic position of nematodes and harpacticoid copepods in and adjacent to Zostera noltii  beds. Biogeosciences , 11: 4001–4014.
  • Ramalho, S., Adão, H., Kiriakoulakis, K., Wolff, G.A., Vanreusel, A. & Ingels, J., 2014. Temporal and spatial variation in the Nazaré canyon (Western Iberian margin): interannual and canyon heterogeneity effects on meiofauna biomass and diversity. Journal of Deep-Sea Research Part I , 83: 102–114.
  • Bertocci, I., Seabra, M., Dominguez, R., Jacinto, D., Ramírez, R., Coca,J. & Tuya, F., 2014. Effects of loss ofalgal canopies along temperature and irradiation gradients in continentalPortugal and the Canary Islands. MarineEcology Progress Series , 506: 47–60.
  • Vafeiadou, A.M., Adão H., M. de Troch & Moens, T., 2013. Sample acidification effects on carbon and nitrogenstable isotope signatures of macrofauna and seagrass tissue from Zostera noltii  beds. Marine and Freshwater Research , 64:741-745.
  • Vafeiadou, A.M., P. Materatski, H. Adão, M. de Troch & T. Moens,2013. Food sources of macrobenthos in an estuarineseagrass habitat (Zostera noltii ) asrevealed by dual stable isotope signatures. MarineBiology , 160 (9): 2517-2523.
  • Sousa, A., Jacinto, D., Penteado, N., Martins, P., Fernandes, J., Silva,T., Castro, J.J. & T. Cruz, 2013. Patterns of distribution andabundance of the stalked barnacle (Pollicipespollicipes ) in the central and southwest coast of continental Portugal. Journal of Sea Research, 83: 187-194.
  • Jacinto, D., Bulleri, F.,Benedetti-Cecchi, L. & T. Cruz., 2013. Patterns of abundance, populationsize, structure and microhabitat usage of Paracentrotuslividus  (Echinodermata: Echinoidea) in SW Portugal and NW Italy. Marine Biology,  160: 1135-1146.
  • Engelen, A.H., Primo, A.L., Cruz, T. & Santos, R., 2013. Faunal differences between the invasive brownmacroalga Sargassum muticum  andcompeting native macroalgae. BiologicalInvasions , 15: 171-183.
  • Alves, A.S., Adão, H., Ferrero, J.T., Marques, J.C., Costa, M.J. &Patrício, J., 2013. Benthic meiofauna asindicator of ecological changes in estuarine ecosystems: the use of nematodesin ecological quality assessment. EcologicalIndicators , 24: 462-475.
  • Tuya,F., E. Cacabelos, P. Duarte, D. Jacinto, J. J. Castro, T. Silva, I. Bertocci,J. N. Franco, F. Arenas, J. Coca & T. Wernberg, 2012. Patterns oflandscape and assemblage structure along a latitudinal gradient in oceanclimate. Marine Ecology Progress Series ,466: 9-19.
  • Patrício,J., Adão, H., Neto, J.M., Alves, S.A., Traunspurger, W. & Marques, J.C.,2012. Do nematode and macrofauna assemblages provide similar ecologicalassessment information? EcologicalIndicators , 14 (1): 124-137.
  • Jacinto, D. & T Cruz, 2012. Paracentrotus lividus  (Echinodermata: Echinoidea) attachment forceand burrowing behavior in rocky shores of SW Portugal. In: Kroh, A. &Reich, M. (eds.) Echinoderm Research 2010: Proceedings of the Seventh EuropeanConference on Echinoderms, Göttingen, Germany. Zoosymposia , 7: 231–240.
  • Van Syoc,R.J., J.N. Fernandes, D.A. Carrison & R.K. Grosberg, 2010. Molecularphylogenetics and biogeography of Pollicipes (Crustacea: Cirripedia), a Tethyan relict. Journal of Experimental Biology and Ecology , 392: 193-199.
  • Ramos, P., Ruano,F., Jesus, D. & Cruz, T., 2010. Macroscopic lesions on the grey triggerfish, Balistes capriscus (Piesces) associatedwith the presence of the pedunculate barnacle, Conchoderma virgatum  (Cirripedia, Thoracica). Crustaceana , 83 (9): 1091-1099.
  • Jacinto D., T.Cruz, T. Silva & Castro, J.J., 2010. The stalked barnacle (Pollicipespollicipes ) harvesting at the Nature Reserve of Berlengas (Portugal):temporal variation and validation of logbook data. ICES Journal of Marine Science, 67: 19-25.
  • Fernandes, J.N.,Cruz, T. & Van Syoc, R.J., 2010. Pollicipescaboverdensis  sp. nov. (Crustacea: Cirripedia: Scalpelliformes) anintertidal barnacle from the Cape Verde Islands. Zootaxa , 2557: 29-38.
  • Cruz, T., Castro,J.J. & Hawkins, S.J., 2010.  Recruitment,growth and population size structure of Pollicipespollicipes  in SW Portugal. Journal ofExperimental Biology and Ecology , 392: 200-209.
  • Castro J.J. & Cruz, T., 2009. Marineconservation in a Southwest Portuguese natural park. Journalof Coastal Research , SI 56:385-389.
  • Alves, A., Adão, H., Patrício, J., Neto, J.M., Costa, M.J. & Marques, J.C., 2009. Spatial distributionof subtidal meiobenthos along estuarine gradients in two Southern Europeanestuaries (Portugal). Journal of theMarine Biological Association of the UK , 89 (8): 1529-1540.
  • Adão, H, Alves, A., Patrício, J, Neto, J.M., Costa, M.J. & Marques, J.C., 2009. Spatial distributionof subtidal Nematoda communities along the salinity gradient in two SouthernEuropean estuaries (Portugal). ActaOecologica , 35: 287-300.
  • Jacinto, D. & Cruz, T., 2008. Tidal settlement of the intertidal barnacles Chthamalus  spp. in SW Portugal: interaction between diel andsemi-lunar cycles.  Marine Ecology Progress Series ,366:129-135.
  • Woodson, C. B., D. I. Eerkes-Medrano, A.Flores-Morales, M. M. Foley, S. K. Henkel, M. Hessing-Lewis, D. Jacinto, L.Needles, M. T. Nishizaki, J. O’Leary, C. E. Ostrander, M. Pespeni, K. B.Schwager, J. A. Tyburczy, K. A. Weersing, A. R. Kirincich, J. A. Barth, M. A.McManus & L. Washburn, 2007. Local diurnal upwelling driven by sea breezesin northern Monterey Bay. Continental Shelf Research , 27: 2289-2302.
  • Queiroga, H.,Cruz, T., dos Santos, A., Dubert, J., Gonzaléz-Gordillo, J.I., Paula, J.,Peliz, A., & Santos, A.M.P., 2007. Oceanographicand behavioural processes controlling invertebrate larval dispersal andrecruitment in the Western Iberia Upwelling Ecosystem. Progress in Oceanography, 74: 174-191.
  • Coleman, R. A., A. J. Underwood, L. Benedetti-Cecchi,P. Åberg, F. Arenas, J. Arrontes, J. Castro, R. G. Hartnoll, S. R. Jenkins, J.Paula, P. D. Santina & S. J. Hawkins, 2006. A continental scale evaluationof the role of limpet grazing on rocky shores. Oecologia , 147: 556-564.
  • Cruz, T., Castro, J.J., Delany, J., McGrath, D.,Myers, A.A., O´Riordan, R. M., Power, A.-M., Rabaça J. & Hawkins, S. J.,2005. Tidal rates of settlement of the intertidal barnacles Chthamalus  spp. in Western Europe: theinfluence of the night/day cycle. Journal of Experimental Marine Biology andEcology, 318: 51-60.
  • O´Riordan, R. M.,Arenas, F., Arrontes, J., Castro, J.J., Cruz, T., Delany, J., Diaz-Caneja,M.B., Fernandez, C., Hawkins, S.J., McGrath, D., Myers, A.A., Oliveros, J.,Pannacciulli, F., Power, A.-M., Relini, G., Rico, J.M., & Silva, T., 2004. Spatialand temporal variation in the recruitment of the intertidal barnacles Chthamalusmontagui  Southward and Chthamalus stellatus (Poli) (Crustacea:Cirripedia) over an European scale. Journal of Experimental Marine Biologyand Ecology,  304: 243-264.
  • Jenkins, S. R., F. Arenas, J. Arrontes, J. Bussell, J.J. Castro, R. A. Coleman, S. J. Hawkins, S. Kay, B. Martínez, J. Oliveros, M.F. Roberts, S. Sousa, R. C. Thompson & R. G. Hartnoll, 2001. European-scaleanalysis of seasonal variability in limpet grazing activity and microalgalabundance. Marine EcologyProgress Series , 211: 193-203.
  • O´Riordan, R.M., Delany, J., McGrath, D., Myers, A.A.,Power, A-M., Ramsay, N.F., Alvarez, D., Cruz,T., Pannacciulli, F.G., Range, P. &Relini, G., 2001. The sizes of some chthamalid barnacle cyprids at settlementon european shores. Marine Ecology,  22 (4): 307-322.
  • Sousa, E., Cruz,T. & Castro, J.J., 2000. Distribution and abundance of co-occurringchthamalid barnacles Chthamalus montagui  and Chthamalus stellatus (Crustacea, Cirripedia) on the southwest coast of Portugal. Hydrobiologia , 440: 339-345.
  • Cruz, T., 1999.Settlement patterns of Chthamalus  spp. at Praia da Oliveirinha (SWPortugal). Acta Oecologica, 20 (4): 285-287.
  • Cruz, T. & Araújo, J., 1999. Reproductivepatterns of Pollicipes pollicipes  (Cirripedia: Pedunculata) in the SWcoast of Portugal. Journal of Crustacean Biology, 19 (2): 260-267.
  • Cruz, T. & Hawkins,S.J., 1998. Reproductive cycle of Pollicipes pollicipes atCabo de Sines (SW coast of Portugal). Journal of the Marine BiologicalAssociation of the United Kingdom, 78: 483-496.
  • Cruz, T., 1993. Growth of Pollicipes pollicipes (Gmelin, 1790) (Cirripedia, Lepadomorpha) on the SW coast of Portugal. Crustaceana , 65 (2): 15 1-158.